1. collect the files that you want to put into a patch...(include version.dat)
2. select the files, right click,(you'll need winrar) click add to archive.
3. In Archive name type the version of the patch.(must be same as version.dat) E.g 1000.exe
4. then click on comment and in the comment box paste this :
Code:
Setup=Autopatch.exe
Silent=2
Overwrite=1
Title=YOUR SERVER NAME HERE
5. click ok and wait for the patch to be created and you're done.
TIPS:
1. if your server does not have an auto patcher i advice that you don't do step 4. Because it's only auto extracting for auto patcher.
2. If your server does not have an auto patcher then the Archive name in step 3 can be any name.
Any more questions let me know.